PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D07G2371
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bHLH
Protein Properties Length: 521aa    MW: 58399.5 Da    PI: 8.7975
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D07G2371genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.2e-12344388554
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  h + Er+RR+++N++f  Lr+llP+      +K +Ka++L+ A eY+ sL
  Gh_D07G2371 344 HMMSERKRREKLNESFVALRSLLPSG-----TKRDKASVLTTAREYLVSL 388
                  8899*********************8.....8**************9777 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.7E-16338406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.11339388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.08E-11339392No hitNo description
Gene3DG3DSA:4.10.280.107.5E-14343403IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-9344388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.8E-12345394IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    Send to blast
MDAVFNLDEA SRAEFLHLLM QSTGCSYICL WSYSFLQQAN CLIGLDGCCN EENSQALGLF  60
LEYKQLILRL ENDNGLVPGF AFKNNQPYIE LRELELQNRA FHETQRQFYR VIKIKCKFYI  120
TKELTTAAFM ACRSGEIELG SSSVVQLNME MEMRSFFSED QLPESTDQNR PSSSSSSLRS  180
LSTSSPDSSL IFTVPTTHEP APSSLQQATI TPSSINDPRR AMQAFSQTGS NIPLPTLESE  240
NAAMTRAILA VLTSPSSSSS SSSTPFYRNQ SLPYNNYRLN PKASAFKRYA TGLGAGPATT  300
PARASLRAQA MMKRAILFYR KFNLARREQL LRSRPGPTSN QLHHMMSERK RREKLNESFV  360
ALRSLLPSGT KRDKASVLTT AREYLVSLKA QIMELNRQKQ LLEAPILPSK EGAAAIEVND  420
PSNERVNVRV IPVPESTSEE RLADLRVTIR GERPIVDILI HLLEFLKLDR KVSLMSIEAN  480
TGVSEFGSVN LVSLRLRIQG DGWDESTFQE AVRRLITDLA Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1347352ERKRRE
2348353RKRREK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012476697.10.0PREDICTED: putative transcription factor bHLH041 isoform X1
TrEMBLA0A0D2QJ470.0A0A0D2QJ47_G
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM70602840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.11e-59bHLH family protein